用三模态肾活检图像实现肾小球多病种自动诊断,解决纳米与微米尺度差异难题。
Cross-modal ultra-scale learning with tri-modalities of renal biopsy images for glomerular multi-disease auxiliary diagnosis
- 设计跨模态超尺度网络,融合电镜、光镜与免疫荧光图像特征
- 在自建数据集上达到95.37%准确率,三项指标均超现有方法
- 首次实现IgA肾病等三种疾病的多病种自动分类,适合病理辅助诊断场景
基于三种肾活检图像构建多模态自动分类模型,可辅助病理科医生识别肾小球多种疾病。然而,透射电镜(TEM)图像在纳米尺度与光学显微镜(OM)或免疫荧光显微镜(IM)图像在微米尺度之间存在显著尺度差异,制约了现有多模态多尺度模型的特征融合效果与分类精度。为此,本文提出跨模态超尺度学习网络(CMUS-Net),利用多重超微结构信息弥合纳米与微米图像间的尺度鸿沟。具体而言,引入稀疏多实例学习模块聚合TEM图像特征;设计跨模态尺度注意力模块促进特征交互,增强病理语义表达;结合多种损失函数,使模型可动态权衡不同模态重要性,实现精准分类。本方法遵循肾活检病理诊断常规流程,首次基于三模态双尺度图像实现IgA肾病(IgAN)、膜性肾病(MN)及狼疮性肾炎(LN)等多病种自动分类。在自建数据集上,CMUS-Net取得95.37±2.41%准确率、99.05±0.53% AUC和95.32±2.41% F1分数。大量实验表明,该方法优于其他知名多模态或多尺度模型,并展现出对膜性肾病分期的良好泛化能力。代码已开源:https://github.com/SMU-GL-Group/MultiModal_lkx/tree/main。
原文摘要 · Abstract (English)
Constructing a multi-modal automatic classification model based on three types of renal biopsy images can assist pathologists in glomerular multi-disease identification. However, the substantial scale difference between transmission electron microscopy (TEM) image features at the nanoscale and optical microscopy (OM) or immunofluorescence microscopy (IM) images at the microscale poses a challenge for existing multi-modal and multi-scale models in achieving effective feature fusion and improving classification accuracy. To address this issue, we propose a cross-modal ultra-scale learning network (CMUS-Net) for the auxiliary diagnosis of multiple glomerular diseases. CMUS-Net utilizes multiple ultrastructural information to bridge the scale difference between nanometer and micrometer images. Specifically, we introduce a sparse multi-instance learning module to aggregate features from TEM images. Furthermore, we design a cross-modal scale attention module to facilitate feature interaction, enhancing pathological semantic information. Finally, multiple loss functions are combined, allowing the model to weigh the importance among different modalities and achieve precise classification of glomerular diseases. Our method follows the conventional process of renal biopsy pathology diagnosis and, for the first time, performs automatic classification of multiple glomerular diseases including IgA nephropathy (IgAN), membranous nephropathy (MN), and lupus nephritis (LN) based on images from three modalities and two scales. On an in-house dataset, CMUS-Net achieves an ACC of 95.37+/-2.41%, an AUC of 99.05+/-0.53%, and an F1-score of 95.32+/-2.41%. Extensive experiments demonstrate that CMUS-Net outperforms other well-known multi-modal or multi-scale methods and show its generalization capability in staging MN. Code is available at https://github.com/SMU-GL-Group/MultiModal_lkx/tree/main.
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