用稀疏切片重建心脏3D模型,精度高且速度快。
Neural Implicit Heart Coordinates: 3D cardiac shape reconstruction from sparse segmentations
- 基于通用心室坐标构建标准化隐式坐标系,实现跨患者一致的解剖参考。
- 仅需少量2D分割即可还原高精度3D轮廓,病患组误差2.51±0.33mm,健康组2.3±0.36mm。
- 适用于临床数据稀缺场景,特别适合心脏结构复杂、噪声大的重建任务。
从稀疏临床影像中准确重建心脏解剖结构仍是个性化建模的重大挑战。尽管神经隐式函数已用于此任务,但其在跨受试者解剖一致性映射中的应用仍受限。本文提出神经隐式心脏坐标(NIHCs),一种基于通用心室坐标的标准化隐式坐标系统,为人类心脏提供统一的解剖参考框架。该方法直接从少量2D分割(稀疏采集)预测NIHCs,并进一步解码为任意分辨率的密集3D分割和高保真网格。在包含5,000个心脏网格的大规模数据集上训练后,模型在临床轮廓重建中表现优异:病患队列(n=4549)的平均欧氏表面误差为2.51±0.33 mm,健康队列(n=5576)为2.3±0.36 mm。NIHC表示即使在极端切片稀疏与分割噪声下,仍能生成解剖一致的重建结果,精准恢复瓣膜平面等复杂结构。相比传统流程,推理时间由60秒以上缩短至5-15秒。结果表明,NIHCs是一种高效稳健的心脏解剖表征,可实现极低输入数据下的个性化3D心脏重建。
原文摘要 · Abstract (English)
Accurate reconstruction of cardiac anatomy from sparse clinical images remains a major challenge in patient-specific modeling. While neural implicit functions have previously been applied to this task, their application to mapping anatomical consistency across subjects has been limited. In this work, we introduce Neural Implicit Heart Coordinates (NIHCs), a standardized implicit coordinate system, based on universal ventricular coordinates, that provides a common anatomical reference frame for the human heart. Our method predicts NIHCs directly from a limited number of 2D segmentations (sparse acquisition) and subsequently decodes them into dense 3D segmentations and high-resolution meshes at arbitrary output resolution. Trained on a large dataset of 5,000 cardiac meshes, the model achieves high reconstruction accuracy on clinical contours, with mean Euclidean surface errors of 2.51$\pm$0.33 mm in a diseased cohort (n=4549) and 2.3$\pm$0.36 mm in a healthy cohort (n=5576). The NIHC representation enables anatomically coherent reconstruction even under severe slice sparsity and segmentation noise, faithfully recovering complex structures such as the valve planes. Compared with traditional pipelines, inference time is reduced from over 60 s to 5-15 s. These results demonstrate that NIHCs constitute a robust and efficient anatomical representation for patient-specific 3D cardiac reconstruction from minimal input data.
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