解决病理切片中不同尺度肿瘤区域的注意力捕捉难题
WSD-MIL: Window Scale Decay Multiple Instance Learning for Whole Slide Image Classification
- 采用动态窗口衰减注意力机制,按尺度渐变捕获局部关联
- 在两个数据集上达领先效果,计算内存降低62%
- 适合关注病理图像分析与高效模型设计的研究者
近年来,预训练基础模型与多实例学习(MIL)的结合提升了计算病理学的诊断准确性。然而,现有MIL方法侧重优化特征提取器和聚合策略,忽略了全切片图像(WSI)中实例间的复杂语义关系。尽管基于Transformer的MIL方法尝试建模实例依赖,但其二次计算复杂度限制了在大规模WSI上的可扩展性。此外,由于不同WSI中肿瘤区域尺度差异显著,现有基于Transformer的方法使用固定尺度注意力机制,难以精确捕捉局部实例相关性,也未考虑距离带来的相关性衰减。为此,我们提出窗口尺度衰减多实例学习(WSD-MIL),旨在增强对不同尺度肿瘤区域的建模能力并提升计算效率。WSD-MIL包含:1)基于聚类采样的窗口尺度衰减注意力模块,通过逐步衰减注意力窗口尺度来捕捉不同尺度下的局部实例关系,同时降低计算成本;2)基于挤压-激励的区域门控模块,动态调整窗口权重以强化全局信息建模。实验结果表明,WSD-MIL在CAMELYON16和TCGA-BRCA数据集上均达到当前最优性能,且计算内存减少62%。代码将公开发布。
原文摘要 · Abstract (English)
In recent years, the integration of pre-trained foundational models with multiple instance learning (MIL) has improved diagnostic accuracy in computational pathology. However, existing MIL methods focus on optimizing feature extractors and aggregation strategies while overlooking the complex semantic relationships among instances within whole slide image (WSI). Although Transformer-based MIL approaches aiming to model instance dependencies, the quadratic computational complexity limits their scalability to large-scale WSIs. Moreover, due to the pronounced variations in tumor region scales across different WSIs, existing Transformer-based methods employing fixed-scale attention mechanisms face significant challenges in precisely capturing local instance correlations and fail to account for the distance-based decay effect of patch relevance. To address these challenges, we propose window scale decay MIL (WSD-MIL), designed to enhance the capacity to model tumor regions of varying scales while improving computational efficiency. WSD-MIL comprises: 1) a window scale decay based attention module, which employs a cluster-based sampling strategy to reduce computational costs while progressively decaying attention window-scale to capture local instance relationships at varying scales; and 2) a squeeze-and-excitation based region gate module, which dynamically adjusts window weights to enhance global information modeling. Experimental results demonstrate that WSD-MIL achieves state-of-the-art performance on the CAMELYON16 and TCGA-BRCA datasets while reducing 62% of the computational memory. The code will be publicly available.
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