arXiv:2512.21782cs.AIcond-mat.mtrl-sci2025-12被引 15

让AI自动设计科学目标,突破传统实验瓶颈

Accelerating Scientific Discovery with Autonomous Goal-evolving Agents

  • 双层架构:大模型分析结果并生成新目标,内层优化求解
  • 发现新型抗生素候选物,对大肠杆菌有效且安全
  • 适合需要反复迭代目标的复杂科学设计任务

近年来,科学发现代理在优化科学家设定的定量目标方面备受关注。然而,对于重大科学挑战,这些目标往往只是不完善的代理指标。我们提出,自动化目标函数设计是科学发现代理的核心未解决问题。本文引入科学自主目标演化代理(SAGA),采用双层架构:外层由大语言模型代理分析优化结果、提出新目标并转化为可计算评分函数;内层在当前目标下执行解决方案优化。该设计使目标空间及其权衡关系得以系统探索,而非固定输入。我们在多个设计任务中验证了该框架,包括抗生素、纳米体、功能性DNA序列、无机材料和化学过程。实验表明,在抗生素设计中识别出一种结构新颖的候选物,对大肠杆菌具有显著活性和良好安全性;在纳米体设计中发现三个全新的PD-L1结合物。结果表明,自动化目标制定能显著提升科学发现代理的效能。

原文摘要 · Abstract (English)

There has been unprecedented interest in developing agents that expand the boundary of scientific discovery, primarily by optimizing quantitative objective functions specified by scientists. However, for grand challenges in science, these objectives may only be imperfect proxies. We argue that automating objective function design is a central, yet unmet need for scientific discovery agents. In this work, we introduce the Scientific Autonomous Goal-evolving Agent (SAGA) to address this challenge. SAGA employs a bi-level architecture in which an outer loop of LLM agents analyzes optimization outcomes, proposes new objectives, and converts them into computable scoring functions, while an inner loop performs solution optimization under the current objectives. This bi-level design enables systematic exploration of the space of objectives and their trade-offs, rather than treating them as fixed inputs. We demonstrate the framework through a wide range of design applications, including antibiotics, nanobodies, functional DNA sequences, inorganic materials, and chemical processes. Notably, our experimental validation identifies a structurally novel hit with promising potency and safety profiles for E. coli in the antibiotic design task, and three de novo PD-L1 binders in the nanobody design task. These results suggest that automating objective formulation can substantially improve the effectiveness of scientific discovery agents.

科学发现目标演化大模型双层架构

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