整合3135名患者数据,构建糖尿病研究大数据库。
MetaboNet: The Largest Publicly Available Consolidated Dataset for Type 1 Diabetes Management
- 合并多个公开数据集,统一格式并保留血糖与胰岛素记录
- 涵盖1228名患者年数据,规模远超现有独立数据集
- 提供免费下载和受控访问双通道,助力算法通用性提升
1型糖尿病(T1D)算法发展受限于现有管理数据集的碎片化与缺乏标准化。当前数据集结构差异大,获取与处理耗时,阻碍数据整合,降低算法可比性与泛化能力。本文构建统一、可访问的T1D数据资源——MetaboNet数据集。将多个公开可用的T1D数据集整合为统一资源,要求包含连续血糖监测(CGM)数据及对应胰岛素泵输注记录,并在有情况下保留碳水化合物摄入与体力活动等辅助信息。MetaboNet数据集共包含3135名受试者和1228名患者年的重叠CGM与胰岛素数据,显著大于现有独立基准数据集。该资源以完全公开子集形式可立即下载(https://metabo-net.org/),并提供需数据使用协议(DUA)的受限子集,后者可通过各自申请流程获取。针对受限子集,配套提供自动化处理管道,可将其转换为标准化的MetaboNet格式。本研究提出一个整合的公共数据集,并描述其无限制与受控访问路径。该数据集覆盖广泛糖化谱和人口统计特征,因此能产生比单个数据集更具普适性的算法性能评估。
原文摘要 · Abstract (English)
Progress in Type 1 Diabetes (T1D) algorithm development is limited by the fragmentation and lack of standardization across existing T1D management datasets. Current datasets differ substantially in structure and are time-consuming to access and process, which impedes data integration and reduces the comparability and generalizability of algorithmic developments. This work aims to establish a unified and accessible data resource for T1D algorithm development. Multiple publicly available T1D datasets were consolidated into a unified resource, termed the MetaboNet dataset. Inclusion required the availability of both continuous glucose monitoring (CGM) data and corresponding insulin pump dosing records. Additionally, auxiliary information such as reported carbohydrate intake and physical activity was retained when present. The MetaboNet dataset comprises 3135 subjects and 1228 patient-years of overlapping CGM and insulin data, making it substantially larger than existing standalone benchmark datasets. The resource is distributed as a fully public subset available for immediate download at https://metabo-net.org/ , and with a Data Use Agreement (DUA)-restricted subset accessible through their respective application processes. For the datasets in the latter subset, processing pipelines are provided to automatically convert the data into the standardized MetaboNet format. A consolidated public dataset for T1D research is presented, and the access pathways for both its unrestricted and DUA-governed components are described. The resulting dataset covers a broad range of glycemic profiles and demographics and thus can yield more generalizable algorithmic performance than individual datasets.
Thank you to arXiv for use of its open access interoperability. PaperDance 不是 arXiv 官方产品;中文卡片由大模型生成,请以原文为准。