arXiv:2601.16631eess.IVcs.CV2026-01

用Mamba+Transformer融合模型提升病理切片中细胞的分割精度。

PanopMamba: Vision State Space Modeling for Nuclei Panoptic Segmentation

  • 结合Mamba与Transformer的混合架构,增强多尺度特征感知能力。
  • 在两个基准数据集上达到最优表现,尤其在小目标和重叠区域分割更优。
  • 首次将Mamba用于全景分割,适合医学图像分析研究者参考。

核细胞全景分割通过整合不同细胞类型的语义与实例分割,支持癌症诊断,以分析组织结构和单个细胞核。主要挑战包括小目标检测、边界模糊及类别不平衡。为此,我们提出PanopMamba,一种新型混合编码器-解码器架构,融合Mamba与Transformer,并通过状态空间建模实现特征增强融合。设计多尺度Mamba主干与基于状态空间模型(SSM)的融合网络,实现金字塔特征中的高效长程感知,扩展纯编码器-解码器框架,促进多尺度核特征间的信息共享。所提出的SSM特征增强融合整合金字塔特征网络与跨空间尺度的动态特征增强,从语义与空间维度提升密集重叠核的特征表达。据我们所知,这是首个基于Mamba的全景分割方法。此外,引入新评估指标:图像级全景质量(iPQ)、边界加权全景质量(wPQ)与频率加权全景质量(fwPQ),专门应对核分割挑战,缓解原始PQ的潜在偏差。在两个多类核分割基准数据集MoNuSAC2020与NuInsSeg上的实验表明,PanopMamba在核全景分割上优于现有最先进方法。结果验证了其鲁棒性,同时凸显各类PQ指标的独特性。代码已开源:https://github.com/mkang315/PanopMamba。

原文摘要 · Abstract (English)

Nuclei panoptic segmentation supports cancer diagnostics by integrating both semantic and instance segmentation of different cell types to analyze overall tissue structure and individual nuclei in histopathology images. Major challenges include detecting small objects, handling ambiguous boundaries, and addressing class imbalance. To address these issues, we propose PanopMamba, a novel hybrid encoder-decoder architecture that integrates Mamba and Transformer with additional feature-enhanced fusion via state space modeling. We design a multiscale Mamba backbone and a State Space Model (SSM)-based fusion network to enable efficient long-range perception in pyramid features, thereby extending the pure encoder-decoder framework while facilitating information sharing across multiscale features of nuclei. The proposed SSM-based feature-enhanced fusion integrates pyramid feature networks and dynamic feature enhancement across different spatial scales, enhancing the feature representation of densely overlapping nuclei in both semantic and spatial dimensions. To the best of our knowledge, this is the first Mamba-based approach for panoptic segmentation. Additionally, we introduce alternative evaluation metrics, including image-level Panoptic Quality ($i$PQ), boundary-weighted PQ ($w$PQ), and frequency-weighted PQ ($fw$PQ), which are specifically designed to address the unique challenges of nuclei segmentation and thereby mitigate the potential bias inherent in vanilla PQ. Experimental evaluations on two multiclass nuclei segmentation benchmark datasets, MoNuSAC2020 and NuInsSeg, demonstrate the superiority of PanopMamba for nuclei panoptic segmentation over state-of-the-art methods. Consequently, the robustness of PanopMamba is validated across various metrics, while the distinctiveness of PQ variants is also demonstrated. Code is available at https://github.com/mkang315/PanopMamba.

医学图像全景分割Mamba细胞识别

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