arXiv:2601.17703cs.CV2026-01

用AI自动分析血细胞镰状变形动态,提升实验效率与精度

An AI-enabled tool for quantifying overlapping red blood cell sickling dynamics in microfluidic assays

  • 基于深度学习自动分割、分类和计数重叠红细胞
  • 在少量标注数据下仍实现高精度分割,有效解决细胞重叠难题
  • 适合研究镰状细胞病机制或药物疗效评估的科研人员

理解镰状细胞在不同生物物理条件下的动态变化,需精准识别其形态转变,尤其在高密度和重叠细胞群体中。本文提出一种自动化深度学习框架,整合AI辅助标注、分割、分类与实例计数,用于时序显微图像中红细胞(RBC)群体的量化分析。实验图像通过Roboflow平台标注,训练nnU-Net分割模型;该模型可预测镰状细胞比例的时序演变,结合分水岭算法解析重叠细胞,显著提升量化准确性。尽管仅需少量标注数据,框架仍表现出优异分割性能,有效应对人工标注稀缺与细胞重叠问题。该方法可使密集细胞悬液的实验通量翻倍以上,捕捉药物依赖性镰变行为,并揭示细胞形态演化的独特力学特征。整体上,该AI驱动框架为微生理系统中的细胞力学研究及治疗评估提供了可扩展、可复现的计算平台。

原文摘要 · Abstract (English)

Understanding sickle cell dynamics requires accurate identification of morphological transitions under diverse biophysical conditions, particularly in densely packed and overlapping cell populations. Here, we present an automated deep learning framework that integrates AI-assisted annotation, segmentation, classification, and instance counting to quantify red blood cell (RBC) populations across varying density regimes in time-lapse microscopy data. Experimental images were annotated using the Roboflow platform to generate labeled dataset for training an nnU-Net segmentation model. The trained network enables prediction of the temporal evolution of the sickle cell fraction, while a watershed algorithm resolves overlapping cells to enhance quantification accuracy. Despite requiring only a limited amount of labeled data for training, the framework achieves high segmentation performance, effectively addressing challenges associated with scarce manual annotations and cell overlap. By quantitatively tracking dynamic changes in RBC morphology, this approach can more than double the experimental throughput via densely packed cell suspensions, capture drug-dependent sickling behavior, and reveal distinct mechanobiological signatures of cellular morphological evolution. Overall, this AI-driven framework establishes a scalable and reproducible computational platform for investigating cellular biomechanics and assessing therapeutic efficacy in microphysiological systems.

AI医疗细胞动力学图像分割镰状细胞病

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