用解剖逻辑生成医学图像,让模型学得更准且不泄露隐私
Fake It Right: Injecting Anatomical Logic into Synthetic Supervised Pre-training for Medical Segmentation
- 用真实解剖结构的标签掩码构建轻量形状库,替代普通几何体
- 通过空间锚点和拓扑图控制器官位置与关系,避免不合理重叠
- 在多个数据集上超越现有方法1.74%以上,适合医疗数据受限场景
视觉变换器(ViTs)在3D医学分割中表现优异,但需大量标注数据。自监督学习(SSL)虽可用无标签数据缓解此问题,但仍面临隐私和物流障碍。公式驱动的监督学习(FDSL)通过合成数学原型预训练提供隐私保护方案,但其通用形状缺乏真实解剖的形态保真度、固定空间布局及器官间关系,导致模型难以学习全局结构先验。为此,本文提出一种融合解剖逻辑的合成监督预训练框架,将基础原型替换为来自5名受试者的去标识化、仅含标签的分割掩码组成的轻量形状库,并引入结构感知的序列化放置策略:通过空间锚点确保解剖定位合理性,利用拓扑图管理器官间交互关系(如防止不可能重叠)。在BTCV和MSD数据集上的实验表明,该方法显著优于当前最先进的FDSL基线和自监督方法,性能提升达1.74%和最高1.66%,且表现出随合成数据量增加而持续提升的稳健扩展性。该方案实现了数据高效、隐私合规的医学分割。
原文摘要 · Abstract (English)
Vision Transformers (ViTs) excel in 3D medical segmentation but require massive annotated datasets. While Self-Supervised Learning (SSL) mitigates this using unlabeled data, it still faces strict privacy and logistical barriers. Formula-Driven Supervised Learning (FDSL) offers a privacy-preserving alternative by pre-training on synthetic mathematical primitives. However, a critical semantic gap limits its efficacy: generic shapes lack the morphological fidelity, fixed spatial layouts, and inter-organ relationships of real anatomy, preventing models from learning essential global structural priors. To bridge this gap, we propose an Anatomy-Informed Synthetic Supervised Pre-training framework unifying FDSL's infinite scalability with anatomical realism. We replace basic primitives with a lightweight shape bank with de-identified, label-only segmentation masks from 5 subjects. Furthermore, we introduce a structure-aware sequential placement strategy to govern the patch synthesis process. Instead of random placement, we enforce physiological plausibility using spatial anchors for correct localization and a topological graph to manage inter-organ interactions (e.g., preventing impossible overlaps). Extensive experiments on BTCV and MSD datasets demonstrate that our method significantly outperforms state-of-the-art FDSL baselines and SSL methods by 1.74\% and up to 1.66\%, while exhibiting a robust scaling effect where performance improves with increased synthetic data volume. This provides a data-efficient, privacy-compliant solution for medical segmentation. The code will be made publicly available upon acceptance.
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