用拓扑分析方法从3D MRI中提取肿瘤特征,准确分类胶质瘤类型。
Brain Tumor Classification from 3D MRI Using Persistent Homology and Betti Features: A Topological Data Analysis Approach on BraTS2020
- 基于持久同调的拓扑特征提取,捕捉肿瘤三维结构本质
- 仅用100个特征即达89.19%准确率,无需深度学习复杂架构
- 结果可解释性强,适合医疗影像分析与临床辅助决策场景
由于磁共振成像(MRI)存在高维和复杂的结构模式,精准且可解释的脑肿瘤分类仍具挑战。本文提出一种基于拓扑数据分析(TDA)的3D MRI脑肿瘤分类框架,直接作用于3D FLAIR图像。利用持久同调提取贝蒂数(Betti numbers):Betti-0描述连通分量,Betti-1描述环结构,Betti-2描述空腔。从BraTS 2020数据集的3D MRI中生成100个紧凑的拓扑特征,有效表征肿瘤三维形态并大幅降维。这些特征用于训练随机森林与XGBoost等经典机器学习模型,实现高/低级别胶质瘤(HGG/LGG)二分类。实验在BraTS 2020上验证,随机森林结合精选贝蒂特征达到89.19%准确率。结果表明,持久同调是一种高效、可解释的3D医学图像分析方法。
原文摘要 · Abstract (English)
Accurate and interpretable brain tumor classification from medical imaging remains a challenging problem due to the high dimensionality and complex structural patterns present in magnetic resonance imaging (MRI). In this study, we propose a topology-driven framework for brain tumor classification based on Topological Data Analysis (TDA) applied directly to three-dimensional (3D) MRI volumes. Specifically, we analyze 3D Fluid Attenuated Inversion Recovery (FLAIR) images from the BraTS 2020 dataset and extract interpretable topological descriptors using persistent homology. Persistent homology captures intrinsic geometric and structural characteristics of the data through Betti numbers, which describe connected components (Betti-0), loops (Betti-1), and voids (Betti-2). From the 3D MRI volumes, we derive a compact set of 100 topological features that summarize the underlying topology of brain tumor structures. These descriptors represent complex 3D tumor morphology while significantly reducing data dimensionality. Unlike many deep learning approaches that require large-scale training data or complex architectures, the proposed framework relies on computationally efficient topological features extracted directly from the images. These features are used to train classical machine learning classifiers, including Random Forest and XGBoost, for binary classification of high-grade glioma (HGG) and low-grade glioma (LGG). Experimental results on the BraTS 2020 dataset show that the Random Forest classifier combined with selected Betti features achieves an accuracy of 89.19%. These findings highlight the potential of persistent homology as an effective and interpretable approach for analyzing complex 3D medical images and performing brain tumor classification.
Thank you to arXiv for use of its open access interoperability. PaperDance 不是 arXiv 官方产品;中文卡片由大模型生成,请以原文为准。