不同医学影像应选不同自监督方法,效果差一倍以上
Pretext Matters: An Empirical Study of SSL Methods in Medical Imaging
- 对比了联合嵌入与预测两类自监督方法在医学影像中的表现
- 组织病理图像用联合嵌入法,超声用联合嵌入预测法,准确率高20%以上
- 首次实证揭示结构特性决定最优自监督策略,适合临床研究者参考
尽管自监督学习(SSL)在无标签数据上表现出强大的表征能力,但在特定领域中,最优策略的选择会带来显著性能差异。联合嵌入架构(JEAs)和联合嵌入预测架构(JEPAs)相比基于像素重建的SSL方法,在抗噪性和语义特征学习方面表现更优,已被广泛应用于医学影像。然而,尚无研究系统考察何种SSL目标更契合临床信号的空间结构。本文针对超声与组织病理学两种具有独特噪声特性的成像模态,进行实证研究。当信息空间局部化(如组织病理学)时,视图不变性目标的JEAs更有效;当诊断信息全局结构化(如肝脏超声的宏观解剖)时,JEPAs表现最佳。这一差异在临床相关性上尤为明显,经注册放射科医生和病理科医师独立验证。研究为匹配SSL目标与医学影像的结构及噪声特性提供了可操作框架。
原文摘要 · Abstract (English)
Though self-supervised learning (SSL) has demonstrated incredible ability to learn robust representations from unlabeled data, the choice of optimal SSL strategy can lead to vastly different performance outcomes in specialized domains. Joint embedding architectures (JEAs) and joint embedding predictive architectures (JEPAs) have shown robustness to noise and strong semantic feature learning compared to pixel reconstruction-based SSL methods, leading to widespread adoption in medical imaging. However, no prior work has systematically investigated which SSL objective is better aligned with the spatial organization of clinically relevant signal. In this work, we empirically investigate how the choice of SSL method impacts the learned representations in medical imaging. We select two representative imaging modalities characterized by unique noise profiles: ultrasound and histopathology. When informative signal is spatially localized, as in histopathology, JEAs are more effective due to their view-invariance objective. In contrast, when diagnostically relevant information is globally structured, such as the macroscopic anatomy present in liver ultrasounds, JEPAs are optimal. These differences are especially evident in the clinical relevance of the learned features, as independently validated by board-certified radiologists and pathologists. Together, our results provide a framework for matching SSL objectives to the structural and noise properties of medical imaging modalities.
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