用短短两帧时间信息提升分子力场预测精度。
Improving Molecular Force Fields with Minimal Temporal Information
- 通过相邻帧间时序关系设计新训练策略,挖掘分子动力学数据
- 仅用两帧时序信息即达最优,更长序列反使性能下降
- 适合追求高精度的分子模拟研究者使用
准确预测三维分子系统的能量与受力是人工智能科学的核心挑战之一。现有高效神经网络可从单个原子构型预测能量和力,但极少考虑其训练数据生成过程中的分子动力学(MD)特性。标准MD模拟产生能量波动、探索势能面的时序轨迹,而非如几何优化般持续降低能量。本文提出新训练策略FRAMES,利用辅助损失函数捕捉MD轨迹中的时序关系。出人意料的是,在两个原子级基准和一个合成系统上,仅用连续两帧的最小时间信息即可获得最佳性能,延长序列反而引入冗余并降低效果。在广泛使用的MD17与ISO17基准上,FRAMES显著优于其Equiformer基线,在能量和力的准确性上表现优异。本工作不仅提出一种提升模型精度的新方法,还表明对原子系统物理先验的提炼,更多时间数据并不总是更好。
原文摘要 · Abstract (English)
Accurate prediction of energy and forces for 3D molecular systems is one of fundamental challenges at the core of AI for Science applications. Many powerful and data-efficient neural networks predict molecular energies and forces from single atomic configurations. However, one crucial aspect of the data generation process is rarely considered while learning these models i.e. Molecular Dynamics (MD) simulation. MD simulations generate time-ordered trajectories of atomic positions that fluctuate in energy and explore regions of the potential energy surface (e.g., under standard NVE/NVT ensembles), rather than being constructed to steadily lower the potential energy toward a minimum as in geometry relaxations. This work explores a novel way to leverage MD data, when available, to improve the performance of such predictors. We introduce a novel training strategy called FRAMES, that use an auxiliary loss function for exploiting the temporal relationships within MD trajectories. Counter-intuitively, on two atomistic benchmarks and a synthetic system we observe that minimal temporal information, captured by pairs of just two consecutive frames, is often sufficient to obtain the best performance, while adding longer trajectory sequences can introduce redundancy and degrade performance. On the widely used MD17 and ISO17 benchmarks, FRAMES significantly outperforms its Equiformer baseline, achieving highly competitive results in both energy and force accuracy. Our work not only presents a novel training strategy which improves the accuracy of the model, but also provides evidence that for distilling physical priors of atomic systems, more temporal data is not always better.
Thank you to arXiv for use of its open access interoperability. PaperDance 不是 arXiv 官方产品;中文卡片由大模型生成,请以原文为准。