arXiv:2605.16799cs.LGcs.AI2026-05KDD被引 1

跨域分子关系学习新模型,提升不同领域分子结构的适应性表征

Cross-Domain Molecular Relational Learning: Leveraging Chemical Structure-Activity Analysis

论文配图:Cross-Domain Molecular Relational Learning: Leveraging Chemical Structure-Activity Analysis
图 1 · 摘自论文原文
  • 基于子结构拓扑差异的梯度反转策略,实现分子结构域间自适应
  • 跨域表征引导机制对齐功能团语义,学习跨域一致性信息
  • 在强域间差异下仍优于16种基线方法,适合药物发现等跨域场景

分子表示的最新进展融合了分子拓扑与视觉模态,为精准的分子关系学习(MRL)开辟了新路径。现有MRL方法多聚焦于域内建模,其固有的域封闭效应限制了在分子科学中的应用,尤其难以揭示跨域交互机制。因此,跨域分子关系学习的需求日益迫切。得益于结构-活性分析,我们提出域对抗训练网络与结构-语义迁移差异(DisTrans),以优化分子结构与视觉图像的跨域自适应表示。1)基于域间子结构拓扑差异的梯度反转策略,学习分子结构的域依赖性,引导模型适配目标域的结构邻接模式,生成可区分域的结构表示。2)采用跨域表示引导机制,对齐源域与目标域的功能团语义信息,学习跨域一致性。在两种典型跨域策略下的实验表明,DisTrans超越16种基线方法,在显著域间差异下仍保持优异性能。

原文摘要 · Abstract (English)

Recent advances in molecular representation integrates molecular topological and visual modalities, opening new avenues for precise Molecular Relational Learning (MRL). Existing MRL methods focus on intra-domain modeling, and their inherent domain-closed effect limits applicability to molecular science, particularly in elucidating cross-domain interaction mechanisms. Consequently, the imperative for Cross-Domain Molecular Relational Learning has become increasingly pressing. Benefiting from structure-activity analysis, we propose the Domain Adversarial Training Network with Structural-Semantic Transfer Discrepancy (DisTrans) to optimize cross-domain adaptive representation for molecular structures and visual images. 1) We employ the gradient reversal strategy based on substructure topological discrepancies between domains to learn the domain dependence of molecular structures. This strategy guides the model to adapt to the structural adjacency patterns in the target domain, generating domain-separable structural representations. 2) We apply the cross-domain representation guidance mechanism to align the functional-group semantic information between the source and target domains, learning cross-domain consistency information. The experimental results in two typical cross-domain strategies demonstrate that DisTrans outperforms 16 baseline methods, maintaining satisfactory performance even under pronounced inter-domain discrepancy.

分子学习跨域适应结构表征

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