用可变大小的皮层超顶点提升阿尔茨海默病影像检测精度
CSV-ViT: A Vision Transformer with the Variable-sized Cortical Supervertices for Detection of Alzheimer's Disease Pathologies

- 基于兴趣区保留的顶点划分生成可变尺寸皮层块(CSV)
- 在三分类任务中优于现有表面模型,最高准确率达89.7%
- 适合需要高精度脑表面分析的神经退行性疾病研究者
阿尔茨海默病确诊依赖昂贵且侵入性的正电子发射断层扫描(PET),推动使用结构磁共振成像(MRI)进行前期筛查。深度学习在非欧几里得流形(尤其是脑皮层表面)上面临挑战,因其球面拓扑特性。现有表面模型常采用固定尺寸的面片,导致边界处顶点重复。多数模型对感兴趣区域(ROI)关注不足,易包含非皮层区域(如内侧壁)。本文提出一种保留ROI的顶点基可变尺寸分块方法,称作皮层超顶点(CSV)。基于此表示,设计了支持可变块尺寸的CSV-ViT,采用填充与掩码感知的嵌入策略。利用T1加权MRI数据,将阿尔茨海默病相关状态分为三类:阿尔茨海默病诊断、淀粉样蛋白阳性、靶向蛋白阳性。实验表明,CSV-ViT在各类任务中均优于近期表面模型,结果提示该框架可辅助在PET或脑脊液检测前实现基于MRI的阿尔茨海默病状态预测。
原文摘要 · Abstract (English)
Confirming Alzheimer's disease (AD) typically relies on positron emission tomography (PET), which remains costly and invasive, motivating the use of structural MRI-based prescreening. Deep learning on non-Euclidean manifolds, particularly brain cortical surfaces, faces significant challenges due to the data's spherical topology. Recent surface models have enabled learning from cortical surface data; however, imposing face-based uniform patches often causes duplicate vertices at patch boundaries. In general, many surface-based models are limited in their awareness of the region of interest (ROI), which can result in non-cortical regions, such as the medial wall, being included. We propose a cortical surface tokenization that performs ROI-preserving, vertex-based, variable-sized patch partitioning. We refer to these cortical surface patches as cortical supervertices (CSVs). Building on this representation, we design the CSV Vision Transformer (CSV-ViT), a variable-size patch-tolerant Vision Transformer that uses padding and a mask-aware patch embedding. We used T1-weighted MRI and evaluated our framework by classifying AD-related status into three categories: AD diagnosis, amyloid positivity, and tau positivity. Across the experiments, CSV-ViT achieved higher classification performance than recent surface-based models. The results suggest that the proposed CSV-ViT may support MRI-based prediction of AD-related status prior to PET or CSF confirmation.
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