通过空间距离建模提升癌症转移风险预测准确率
Predicting Metastatic Risk from Primary Cancer Tissue Architecture via Distance-Aware Spatial Modeling

- 引入距离感知的组织建模框架,捕捉组织块间的几何布局关系
- 在前列腺、结肠和肾癌数据集上均显著优于传统方法
- 适合从事数字病理与癌症预后研究的医生和算法工程师
从原发肿瘤的数字H&E切片中预测远处转移是计算病理学中的关键挑战。多实例学习(MIL)方法可关注全切片图像(WSI)中具有转移前特征的子区域,但传统MIL模型将组织块视为无序集合,忽略了定义这些区域排列与相互作用的空间结构。本文提出距离感知组织建模(DTMF-MIL),一种融合显式距离先验的空间多实例学习框架。通过计算符号距离函数(SDF)捕捉特征相似区域,并用径向基距离响应和局部SDF统计量表示每个组织块,从而学习其相对于区域内部与边界的相对位置。相似组织块间的交互在局部组织邻域内被建模,并用于引导切片级注意力,聚合特征证据进行转移预测。在大型医疗系统内部前列腺穿刺活检队列(IPC)及TCGA-COAD、TCGA-KIRC公开数据集上,使用多种病理基础模型骨干网络进行评估。在多数数据集、骨干网络与评价指标组合下,DTMF-MIL均取得最优表现。
原文摘要 · Abstract (English)
Predicting distant metastasis from the digital H & E slides of the primary tumor is a critical yet challenging task in computational pathology. Multiple Instance Learning (MIL) approaches can attend to subdomains in whole slide images (WSIs) that harbor features of pre-metastatic cancer regions. However, conventional MIL models largely treat tissue patches as unordered bags, discarding the spatial layout that defines how these regions are arranged and interact across the tissue. We propose that metastatic risk is shaped not only by local patch appearance, but also by the geometric organization of patches in the WSI and the interaction between the tissue compartments. To this end, we introduce Distance-aware Tissue Modeling for Multiple Instance Learning (DTMF-MIL), a spatial MIL framework that reinforces feature embeddings with explicit distance priors. By computing signed distance functions (SDFs) to capture regions with similar features, and representing each patch with radial-basis distance responses and local SDF statistics, DTMF-MIL learns positions of patches with respect to regional interiors and boundaries. The interactions between similar patches are contextualized across local tissue neighborhoods and used to guide slide-level attention while pooling patch feature evidence for metastasis prediction. We evaluate DTMF-MIL for prediction of distant prostate cancer metastasis in an internal prostate needle-biopsy cohort (IPC) from a large hospital system and on public TCGA-COAD and TCGA-KIRC datasets across multiple pathology foundation-model backbones. Across most dataset, backbone, and metric combinations, DTMF-MIL achieves the strongest results consistently.
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