arXiv:2607.05153stat.MLcs.LG2026-07

基于对称性构建因果模型,处理空间、网络等依赖数据。

Geometric Causal Models

论文配图:Geometric Causal Models
图 1 · 摘自论文原文
  • 用群论刻画数据生成过程的对称性,实现因果识别
  • 结合几何深度学习与贝叶斯推断,可估计遗传变异效应
  • 适用于基因组、空间等非独立数据,适合生物医学研究

科学家常需从非独立同分布的结构化数据(如空间数据、网络数据或分子数据)中进行因果推断。本文提出几何因果模型(GCM),利用数据生成过程中的内在对称性来实现因果推断。例如,在空间数据中考虑平移对称性,在图数据中考虑节点置换对称性。我们通过群论形式化对称性,借助可度量群的遍历理论建立因果识别,并结合几何深度学习与可扩展贝叶斯推断进行估计。当数据为序列且对称性为置换等变时,模型退化为独立同分布因果模型和do-演算;使用其他结构和对称性时,可发现新型因果模型。以DNA对称性为例,构建了融合深度功能基因组模型与DNA语言模型的因果框架,用于估计遗传变异影响。在半合成数据上进行了验证。

原文摘要 · Abstract (English)

Scientists often seek to draw causal inferences from structured data that is not independently and identically distributed, such as spatial data, network data, or molecular data. We develop geometric causal models (GCMs), a framework for causal inference from dependent data that exploits underlying symmetries of the data generating process. For example, in spatial data, we consider processes that are symmetric under translations, or in graph data, symmetric under permutations of the nodes. We show how symmetries, formalized with group theory, can enable causal identification and estimation. We deploy ergodic theory for amenable groups to establish identification, and combine geometric deep learning with scalable Bayesian inference for estimation. We recover i.i.d. causal models and do-calculus when the data is a sequence and the symmetry is permutation equivariance, and find novel types of causal models when we use alternate structures and symmetries. As an example, we construct a causal model that satisfies the symmetries of DNA. This GCM enables new estimators for the effects of genetic variation, combining deep functional genomics models to describe outcomes and DNA language models to describe propensities. We illustrate on semisynthetic data.

因果推断几何学习基因组学对称性

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