统一处理糖尿病血糖数据,让模型预测更可复现。
GlucoTune: A Unified Framework for Blood Glucose Preprocessing, Forecasting, and Benchmarking in Diabetes

- 用可配置的流程标准化血糖数据预处理。
- 支持多种模型与数据集,直接从原始数据训练。
- 提供公开排行榜,方便公平比较算法效果。
血糖时间序列数据的预处理在1型糖尿病管理的数据驱动方法中至关重要,但常被忽视。缺乏标准预处理流程和评估协议,导致研究难以复现且对比困难,加之隐私与许可限制,预处理数据难以共享。为此,我们提出GlucoTune,一个全面且可扩展的框架,实现从原始数据到模型评估的全流程可复现实验。通过可移植的YAML配置文件定义可配置预处理管道,确保一致数据处理而不需分发敏感数据。GlucoTune提供统一接口用于模型实现、训练与评估,集成多个公开数据集及最先进的血糖预测与通用时间序列预测方法,并支持灵活扩展。为促进透明评估,框架内置基准排行榜,报告跨数据集、预处理配置与模型的性能结果,支持系统性对比。我们通过大量实验验证其有效性,并在用户研究中评估可用性。
原文摘要 · Abstract (English)
Preprocessing blood glucose time-series data is a critical yet often overlooked step in developing data-driven methods for diabetes management, particularly for type 1 diabetes. The lack of standardized preprocessing workflows and evaluation protocols hinders reproducibility and complicates fair comparison across studies. These challenges are further exacerbated by data-sharing restrictions, as privacy and licensing constraints often prevent the redistribution of preprocessed medical datasets. To address these limitations, we present GlucoTune, a comprehensive and extensible framework for reproducible experimentation with blood glucose time-series data. The framework standardizes the entire experimental workflow, from preprocessing to model evaluation, enabling reproducible experiments directly from the original datasets. Reproducible preprocessing is achieved through configurable pipelines defined in portable YAML configuration files, ensuring consistent data handling without distributing sensitive preprocessed data. Beyond preprocessing, GlucoTune provides a unified interface for implementing, training, and evaluating blood glucose prediction models. The framework integrates public datasets through standardized wrappers and provides a curated collection of state-of-the-art blood glucose prediction and general time-series forecasting methods, while remaining readily extensible to additional datasets, preprocessing strategies, and forecasting models. To promote transparent and consistent evaluation, GlucoTune includes a benchmarking leaderboard that reports results across datasets, preprocessing configurations, and forecasting methods, enabling systematic comparison of experimental settings. We demonstrate the effectiveness of GlucoTune through comprehensive experiments and assess its usability in a user study.
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