构建首个跨学科科学流程结构化描述框架,助力科研复现与自动化。
SciSchema.org: A Multidisciplinary Collection of Schemas for Structured Scientific Process Descriptions

- 通过人机协作流程生成16个领域科学流程模板,涵盖输入输出、参数条件等字段。
- 提供JSON Schema与SHACL格式的完整数据集,支持知识图谱与信息抽取。
- 适合科研人员、数据标注者及知识工程开发者用于结构化科研描述。
科学过程常分散在论文文字、表格、图表、协议和补充材料中,难以比较、复现与重用。我们发布SciSchema.org首个版本,包含生物学、材料化学、成像测量、物理与心理学等5个领域的16个专家标注的结构化流程模板。每个模板定义可复用的字段,包括输入输出、材料仪器、参数条件、步骤流程、测量数据及溯源信息。通过大模型生成候选结构并结合专家反馈迭代优化,最终形成主模板。数据集包含最终模板(JSON Schema与SHACL)、中间模型输出、专家反馈记录、源论文元数据、社区开发材料与分析脚本。技术验证涵盖结构合理性、开发溯源、专家评审与语法合规性。该集合支持结构化标注、元数据增强、科学知识图谱构建、信息提取与跨研究对比。
原文摘要 · Abstract (English)
Scientific processes are often described in heterogeneous article discourse, with details needed for comparison, reproducibility, reuse, and automation dispersed across prose, tables, figures, protocols, and supplementary files. We present the first release of SciSchema.org, a multidisciplinary collection of 16 expert-annotated schemas spanning Biology & Biotechnology, Materials & Chemistry, Imaging & Measurement, Physics, and Psychology. Each schema defines reusable fields for describing process instances, including inputs, outputs, materials, instruments or software, parameters, conditions, procedural steps, measurements, and provenance-related information. The schemas were created through a human-in-the-loop schema-mining workflow in which large language models generated candidate structures from process specifications, scientific articles, and expert feedback, followed by domain-expert construction of final master schemas. The dataset contains final schemas in JSON Schema and SHACL formats, intermediate model-generated schemas, expert-feedback records, source-paper metadata, community-development materials, and analysis scripts. Technical validation assessed schema structure, development provenance, expert review, and syntactic conformance. The collection supports structured annotation, metadata enrichment, scientific knowledge graphs, information extraction, semantic publishing, and cross-study comparison.
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