arXiv:2608.20402cs.CLcs.AI2026-08

构建跨中西医的症候中心知识图谱,精准关联症状与诊疗关系。

LingShu: A Large-Scale Symptom-Centric Contextualized Knowledge Graph Bridging Traditional Chinese Medicine and Modern Biomedicine

论文配图:LingShu: A Large-Scale Symptom-Centric Contextualized Knowledge Graph Bridging Traditional Chinese Medicine and Modern Biomedicine
图 1 · 摘自论文原文
  • 以症候为中心,融合多源数据构建双结构知识图谱。
  • 包含1733万实体、3947万关系,覆盖病症-草药等条件化关联。
  • 适合中医现代化、精准医疗研究者使用,支持智能问答与推理。

生物医学知识图谱对知识组织至关重要,但传统二元关系难以表达医学知识的条件性。症候为连接中医(基于症候模式辨证论治)与现代医学(将临床表现与疾病及分子机制关联)提供了共同表型层。本文提出LingShu,一个大规模症候中心的上下文知识图谱,用于弥合中西医差异。本研究分析的导出版本包含1733万原子级实体记录和3947万关系记录,包括1719万语义三元组和2229万上下文四元组。LingShu通过自然语言处理、术语标准化与人工审核流程,整合临床电子病历、权威中医典籍、生物医学本体及人工整理的知识库。其核心创新在于混合数据模型:保留64种类型三元组以保证广泛连通性,同时引入35种上下文四元组以捕捉条件性医学关联,明确编码与证候相关的中药疗效、疾病背景下的药物效应、人群特异性临床关联及机制相关的治疗反应。此外,我们开发了网页平台(http://www.tcmkg.com/),集成图可视化、基于图的推理与证据驱动的知识问答代理。

原文摘要 · Abstract (English)

Biomedical knowledge graphs (KGs) are pivotal for knowledge organization, yet traditional binary relations often struggle to represent the conditional nature of biomedical knowledge. Symptoms provide a shared phenotypic layer for linking Traditional Chinese Medicine (TCM), which relies on symptom patterns for syndrome differentiation and treatment selection, with modern biomedicine, which connects clinical manifestations to diseases and molecular mechanisms. We present LingShu, a large-scale symptom-centric contextualized knowledge graph designed to bridge TCM and modern biomedicine. The exported version of LingShu analyzed in this study comprises 17.33 million atom-level entity records and 39.47 million relation records, including 17.19 million semantic triples and 22.29 million contextualized quadruples. LingShu integrates multi-source data, including clinical electronic medical records, authoritative TCM texts, biomedical ontologies, and curated knowledge bases, through a pipeline combining natural language processing, terminology normalization, and human-in-the-loop verification. A key innovation of LingShu is its hybrid data model: it maintains 64 typed triple relation patterns to ensure broad connectivity, while incorporating 35 contextual quadruple relation patterns to capture conditional medical associations. This dual-structure approach explicitly encodes conditional knowledge, providing a granular representation of the contexts associated with medical relations. These contextualized relations cover syndrome-dependent herb efficacy, disease-contextualized drug effects, population-specific clinical associations, and mechanism-related therapeutic responses. Furthermore, we developed a web platform (http://www.tcmkg.com/) that integrates graph visualization, graph-based reasoning, and an evidence-grounded knowledge question-answering agent.

知识图谱中西医融合症候分析智能医疗

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