用深度学习分析耳蜗纤维化,助力提升人工耳蜗听力效果
Towards Investigating Residual Hearing Loss: Quantification of Fibrosis in a Novel Cochlear OCT Dataset

- 基于OCT图像构建新型耳蜗纤维化数据集,采用改进UNet模型实现精准分割
- 新模型在高分辨率图像上表现最佳,可重复量化纤维化程度
- 成果可用于研究植入后纤维化机制,适合听觉医学与计算机视觉交叉研究者
耳蜗植入物(CIs)通过电刺激听神经恢复听力。混合型耳蜗植入(EAS)结合低频残余听力与电刺激,但植入后引发的耳蜗纤维化可能损害残余听力功能,降低EAS疗效。本研究建立并标注了慢性植入豚鼠耳蜗的光学相干断层扫描(OCT)图像数据集,用于评估纤维化程度。我们测试多种先进语义分割模型,并对比其识别纤维化及其他关键结构的性能。结果表明,改进的2D-OCT-UNET模型在放大后的高分辨率输入下表现最优。首次成功将计算机视觉方法应用于植入耳蜗的纤维化OCT数据。实验验证该模型能可靠计算纤维化负荷。数据集与代码已开源:https://github.com/juliadietlmeier/CF-OCT-segmentation
原文摘要 · Abstract (English)
Objective: Cochlear implants (CIs) are bionic prostheses that restores hearing via electrical stimulation of the auditory nerve. Hybrid CIs, which use electroacoustic stimulation (EAS), combine residual low-frequency acoustic hearing with CI electrical stimulation. Intracochlear fibrosis, which forms in response to the presence of the implant, may impede residual hearing function and gradually reduce the efficacy of EAS. It is therefore a translational objective to study the formation of cochlear fibrosis in rodents, with the goal of reducing fibrotic burden and improving outcomes for CI patients. Methods: We generate and annotate a novel dataset of optical coherence tomography (OCT) images from chronically implanted guinea pigs as part of an ongoing study focused on implant induced fibrosis. Objectively assessing fibrotic burden in this model, with high resolution and repeatability, presents an obvious use case for computer vision methods. Results: We present the results of several state-of-the-art semantic segmentation models and compare their efficacy for identifying cochlear fibrosis and other relevant annotations, using a new library of manually segmented OCT images. Conclusions: We find that the best performance is achieved by using a modified version of the well-known UNET architecture (which we term 2D-OCT-UNET) that operates on the upscaled OCT input resolution. Significance: For the first time, we have successfully applied computer vision techniques to an OCT dataset of implanted cochleae with fibrosis. Using this deep learning model, the cochlear fibrotic burden calculation can be reliably carried out as we verify in our experimental section. The dataset and the project code are available at: https://github.com/juliadietlmeier/CF-OCT-segmentation
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