用稀疏标注训练4D网络,实现跨中心精准主动脉分割
Segmentation of the aorta in 4D flow MRI using 4D convolutional kernels and learning from sparse annotations

- 设计轻量4D卷积核捕捉时序信息,仅需2D专家轮廓和中心线即可训练
- 在内外部数据集上达0.927/0.911的Dice分数,尤其改善舒张期分割
- 支持多中心多设备数据泛化,适合临床自动化血流动力学分析
4D流动MRI中主动脉自动分割对可重复的血流动力学评估至关重要,但受限于稀少的密集标注和高计算成本。本文开发了全自动化4D(3D+时间)U-Net,用于分割升主动脉、弓部及近端降主动脉,采用参数高效的混合4D卷积核捕捉时序上下文,并利用现有2D专家轮廓与中心线生成稀疏4D标签,避免密集4D标注需求。训练使用来自8个中心、2个厂商的268例扫描数据,评估包含内部测试集(32例)和外部对比增强集(30例;不同地点、协议、标注者),并与逐帧3D网络及两种半自动参考方法对比。相比时间分辨标注,4D U-Net在内部测试集上获得0.927的Dice分数,在外部测试集上为0.911,优于3D U-Net的0.919/0.847,静态PC-MRA的0.893以及基于配准传播的0.808;收缩期差异小,舒张期差异显著。与专家轮廓在峰值速度、净流量、轴向与周向壁剪切应力及直径上的一致性均优秀(内部ICC≥0.954,外部≥0.980),半自动方法表现较差。该方法为自动化血流动力学分析提供可重复的时间分辨主动脉分割,并在多中心、多厂商及独立对比增强数据上具有良好泛化能力。模型已公开。
原文摘要 · Abstract (English)
Automated aortic segmentation in 4D flow MRI is essential for reproducible hemodynamic assessment but is limited by scarce dense annotations and high computational demands. We developed a fully automated 4D (3D+time) U-Net for segmenting the ascending aorta, arch, and proximal descending aorta, using a parameter-efficient hybrid 4D kernel to capture temporal context and sparse 4D labels derived from existing 2D expert contours and centerlines, thereby avoiding the need for dense 4D annotations. Training comprised 268 scans from 8 centers and 2 vendors, with evaluation on an internal test set (32 scans) and an external post-contrast set (30 scans; different site, protocol, and annotator), compared against frame-wise 3D networks and two semi-automatic references. Against time-resolved annotations, the 4D U-Net achieved Dice scores of 0.927 (internal) and 0.911 (external), versus 0.919/0.847 for the 3D U-Net, 0.893 for static PC-MRA, and 0.808 for registration-based propagation; differences were small in systole but pronounced in diastole. Agreement with expert contours for peak velocity, net flow, axial and circumferential wall shear stress, and diameters was excellent (ICC >=0.954 internal, >=0.980 external), while semi-automatic references performed worse. The method thus provides reproducible, time-resolved aortic segmentation for automated hemodynamic analysis and generalizes across multicenter, multivendor, and independent post-contrast data. The model is publicly available.
Thank you to arXiv for use of its open access interoperability. PaperDance 不是 arXiv 官方产品;中文卡片由大模型生成,请以原文为准。